Hi,
Sorry, this took so long, I've been busy. I'll talk to this one first.
Like I said I have years of experience repairing homes. It's just the sealant, what and where, and in what order, is what I lack knowledge on.
Here, this will help with more details on the sealants as I explained it to another club member
Late 70s 11FKS Build
Behind the moldings and windows, doors, etc., they seal to the camper; originally, they used putty tape, like the rest of the RV industry does, still does.
What you want to use that will last is high-quality sealing butyl tape, 1" wide, 1/8" thick, that works in most places. You can trim it if the flange is less than 1". I now use the GSSI brand, which I have since learned is owned by H.B. Fuller, and the website has undergone changes.
Here is the supply house from which I purchase, along with the specifications. GSSI MB-10A on the older format before the Fuller buyout, which tells more about the tape
1 in. wide X 1/8 X 50 ft. High-Temp. Butyl Rubber Sealant Tape (1)
You don't have to get that exact brand, but you should use the same type of butyl sealing tape, not the RV industry putty tape. If you have a local roofing supply or a steel building supply house, they use this high-quality butyl when sealing up buildings. Pole barns even use it. They want a sealing tape that lasts 20-plus years and doesn't require a second thought. See what you can find locally; you most likely won't find it at the average RV dealer, as they will likely sell you the putty tape.
Additionally, you may have noticed how I add extra sealing tape to help fill the corrugations in the siding. This makes a big difference to ensure those moldings, windows, doors, etc. are totally sealed to the siding.
There is also a second step I will add on the siding: you can caulk the exposed joint over the butyl to provide double protection and prevent dirt and mold from sticking to the exposed butyl joint. I have used Dicor nonsag caulk and now also use Geocel Proflex RV. The link above also discusses this topic and provides a link to a post on how to apply it.
Dicor Questions. Both Proflex RV and Dicor nonsag lap sealant are applied in the same manner.
A heads up: on either caulk, do not apply it to hot siding (80°F plus) from a hot summer day—everything is drying way too fast for you to tool it out nice and smooth. Also, apply short sections. Use a 2 ft length of caulk, stop, then smooth it out, apply more, and repeat this process in short sections. If you put 4 to 6 ft of caulk down and then try to tool it out, it all gels up, as it starts to cure quickly.
The rear roof leak, as you are describing, can also point to water going down the back wall. The water does not stay in the attic. It seeps down the wall cavities and the corner moldings area. I bring this up as if you are going to open up the roof, ideally, you deal with the back wall at the same time, so you are building on a solid foundation.
Here is a quick way to check if water has reached the bottom of the rear wall cavity. Just above the bumper on the bottom piece of siding are hex head screws, they take a 1/4" hex driver bit to unscrew them. Please remove them and look for rusted threads. See here for the screws I mean.
Pull the screws and look at the threads; if they have rusted threads or more advanced rusted heads, the wood they are screwed into is water-infected. If there is goo on the threads, it's very wet now. The corner moldings screws also tell a story. If they come out rusted, there was or is also wet wood there. The corner moldings, all four of them, are major actors in leaky over time due to degraded putty tape
Now, to the roof, you can do a local repair without removing the entire roof. I have done several of these for friends, and the approach depends on the water damage. The thick corrugate backer the rubber membrane is glued to, wicks water. And when that happens, the corrugated material rots, and the rubber is left with no support. There are fixes for that also; you have to add a substrate to support the rubber so the water will not pond.
If you feel the roof, does it feel bouncy like a tire tube? That is a sign that the backer board is deteriorated and only the rubber remains. Try by feeling how big that boundy rubber band area is and report back. I can give some suggestions on how to work with that.
Also, note that you cannot walk directly on the roof. You have to use 3/8" to 1/2" thick plywood sheets in place of the rafters to support your weight. Use a tarp or other material to protect the wood from abrasion against the rubber. I use 2 ft x 4 ft small pieces of plywood. Easy enough to haul up the ladder and place, sufficient to span the rafters. See here as I am servicing the AC unit.
Let us know how big a spot or spots you have, and I can better help point you to what you need to remove the roof and options for the repair. The gutter rails hold the overlap of the roof membrane to the siding. You can't lift the membrane without the gutter rail partly detached from the area you need to work on.
I hope this helps.
John